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UFS-dev PR#94 #126

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merged 9 commits into from
Mar 15, 2024
Merged

UFS-dev PR#94 #126

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e7380dd
Fix out-of-bounds access in module_diag_hailcast.F90 which crashes RR…
SamuelTrahanNOAA Jan 17, 2024
b471de6
Fix potential divide by zero in ww3; Add timers to WW3 cap (was #2086…
DeniseWorthen Jan 19, 2024
adfcede
Use MPI_Bcast instead of multiple p2p messages to update nest from pa…
dkokron Jan 22, 2024
24f5a41
Update diag_table for global coupled iau test for mom6 history output…
junwang-noaa Jan 24, 2024
932a532
Updates related to component land model (Combined PR#2107) (#1845)
uturuncoglu Jan 26, 2024
fc9ad4e
Merge commit '932a532516e8b9fd7aa13cc137f777cbcc8e8709' into ufs-dev-…
grantfirl Feb 6, 2024
55b39ea
Merge branch 'main' into ufs-dev-PR94
grantfirl Mar 14, 2024
62b59e2
update tests/machines from latest rt.sh
grantfirl Mar 14, 2024
f2b2739
update FV3 and .gitmodules
grantfirl Mar 15, 2024
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2 changes: 1 addition & 1 deletion CDEPS-interface/CDEPS
Open in desktop
Submodule CDEPS updated 35 files
+46 −0 .github/actions/buildcdeps/action.yaml
+29 −54 .github/workflows/extbuild.yml
+4 −0 .gitignore
+35 −21 CMakeLists.txt
+1 −1 README.md
+3 −5 cime_config/buildlib
+15 −7 cime_config/buildlib_comps
+246 −131 cime_config/stream_cdeps.py
+16 −3 datm/CMakeLists.txt
+39 −8 datm/atm_comp_nuopc.F90
+6 −6 datm/cime_config/buildnml
+4 −2 datm/cime_config/config_component.xml
+110 −1 datm/cime_config/namelist_definition_datm.xml
+43 −42 datm/cime_config/stream_definition_datm.xml
+165 −44 datm/datm_datamode_era5_mod.F90
+379 −0 datm/datm_datamode_simple_mod.F90
+14 −1 dice/CMakeLists.txt
+14 −6 dice/ice_comp_nuopc.F90
+14 −1 dlnd/CMakeLists.txt
+17 −7 dlnd/lnd_comp_nuopc.F90
+14 −1 docn/CMakeLists.txt
+7 −7 docn/cime_config/config_component.xml
+12 −7 docn/ocn_comp_nuopc.F90
+13 −0 drof/CMakeLists.txt
+1 −1 drof/cime_config/config_component.xml
+13 −7 drof/rof_comp_nuopc.F90
+9 −2 dshr/dshr_fldlist_mod.F90
+1 −1 dshr/dshr_mod.F90
+13 −0 dwav/CMakeLists.txt
+19 −10 dwav/wav_comp_nuopc.F90
+2 −0 share/CMakeLists.txt
+1,048 −0 share/shr_file_mod.F90
+88 −0 share/shr_nl_mod.F90
+5 −3 streams/CMakeLists.txt
+22 −9 streams/dshr_stream_mod.F90
3 changes: 3 additions & 0 deletions CDEPS-interface/cdeps_files.cmake
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Original file line number Diff line number Diff line change
Expand Up @@ -20,6 +20,8 @@ list(APPEND cdeps_share_files
CDEPS/share/shr_string_mod.F90
CDEPS/share/shr_sys_mod.F90
CDEPS/share/shr_timer_mod.F90
CDEPS/share/shr_file_mod.F90
CDEPS/share/shr_nl_mod.F90
)

list(APPEND cdeps_streams_files
Expand All @@ -46,6 +48,7 @@ list(APPEND cdeps_datm_files
CDEPS/datm/datm_datamode_gfs_mod.F90
CDEPS/datm/datm_datamode_gfs_hafs_mod.F90
CDEPS/datm/datm_datamode_jra_mod.F90
CDEPS/datm/datm_datamode_simple_mod.F90
)

list(APPEND cdeps_dice_files
Expand Down
2 changes: 1 addition & 1 deletion CMEPS-interface/CMEPS
Open in desktop
Submodule CMEPS updated 7 files
+1 −3 cesm/driver/ensemble_driver.F90
+1 −0 cesm/driver/esm.F90
+0 −1 cesm/driver/esm_time_mod.F90
+44 −18 mediator/esmFldsExchange_ufs_mod.F90
+0 −3 mediator/med.F90
+1 −0 mediator/med_map_mod.F90
+350 −329 ufs/ufs_io_mod.F90
3 changes: 1 addition & 2 deletions CMEPS-interface/CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -178,8 +178,7 @@ set_target_properties(cmeps PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_
target_include_directories(cmeps PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_compile_definitions(cmeps PRIVATE ${CDEPS_SHARE_DEFS})
target_link_libraries(cmeps PUBLIC fms
esmf
target_link_libraries(cmeps PUBLIC esmf
PIO::PIO_Fortran)
if(OpenMP_Fortran_FOUND)
target_link_libraries(cmeps PRIVATE OpenMP::OpenMP_Fortran)
Expand Down
2 changes: 1 addition & 1 deletion CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -149,7 +149,7 @@ if(FMS)
elseif (APP MATCHES "^(S2S|S2SA|S2SW|S2SWA|S2SWAL|NG-GODAS)$")
add_library(fms ALIAS FMS::fms_r8)
endif()
if(APP MATCHES "^(ATM|ATMAERO|ATMAQ|ATMWM|ATMW|ATML|LND|HAFS|HAFS-ALL)$")
if(APP MATCHES "^(ATM|ATMAERO|ATMAQ|ATMWM|ATMW|ATML|HAFS|HAFS-ALL)$")
if(32BIT)
add_library(fms ALIAS FMS::fms_r4)
else()
Expand Down
2 changes: 1 addition & 1 deletion FV3
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Submodule FV3 updated 19 files
+15 −9 .github/workflows/GCC.yml
+14 −1 CMakeLists.txt
+1 −1 atmos_cubed_sphere
+260 −6 atmos_model.F90
+1 −0 ccpp/config/ccpp_prebuild_config.py
+86 −25 ccpp/data/GFS_typedefs.F90
+167 −3 ccpp/data/GFS_typedefs.meta
+216 −13 ccpp/driver/GFS_diagnostics.F90
+7 −17 ccpp/driver/GFS_restart.F90
+1 −1 ccpp/physics
+1 −0 ccpp/suites/suite_FV3_GFS_v17_p8.xml
+18 −4 cpl/module_cplfields.F90
+17 −0 docs/CMakeLists.txt
+2,665 −0 docs/Doxyfile.in
+5 −0 docs/user_guide.md
+118 −28 io/module_fv3_io_def.F90
+57 −47 io/module_write_internal_state.F90
+52 −8 io/module_write_netcdf.F90
+36 −16 module_fv3_config.F90
2 changes: 1 addition & 1 deletion MOM6-interface/MOM6
Open in desktop
Submodule MOM6 updated 1 files
+71 −6 config_src/drivers/nuopc_cap/mom_cap.F90
2 changes: 1 addition & 1 deletion NOAHMP-interface/CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -64,7 +64,7 @@ add_library(noahmp STATIC ${_noahmp_cap_files} ${_noahmp_ccpp_files} ${_noahmp_f
set_target_properties(noahmp PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod)
target_include_directories(noahmp PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<INSTALL_INTERFACE:mod>)
target_link_libraries(noahmp PUBLIC esmf fms)
target_link_libraries(noahmp PUBLIC esmf)

###############################################################################
### Install
Expand Down
2 changes: 1 addition & 1 deletion NOAHMP-interface/noahmp
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Submodule noahmp updated 30 files
+ − .github/workflows/data/oro_data.tile1.nc
+ − .github/workflows/data/oro_data.tile2.nc
+ − .github/workflows/data/oro_data.tile3.nc
+ − .github/workflows/data/oro_data.tile4.nc
+ − .github/workflows/data/oro_data.tile5.nc
+ − .github/workflows/data/oro_data.tile6.nc
+86 −25 .github/workflows/datm_noahmp.yaml
+56 −47 .github/workflows/tests/test_datm_lnd.yaml
+38 −53 .github/workflows/tests/test_datm_lnd/datm.yaml
+63 −72 .github/workflows/tests/test_datm_lnd/lnd.yaml
+17 −17 CMakeLists.txt
+12 −9 drivers/ccpp/noahmp_tables.f90
+11 −3 drivers/ccpp/noahmpdrv.F90
+32 −3 drivers/ccpp/noahmpdrv.meta
+3 −2 drivers/ccpp/physcons.F90
+3 −0 drivers/ccpp/set_soilveg.f
+3 −1 drivers/ccpp/sfc_diff.f
+22 −11 drivers/ccpp/update.sh
+19 −8 drivers/nuopc/docs/source/BuildingAndRunning.rst
+8 −8 drivers/nuopc/docs/source/ComponentTesting.rst
+83 −27 drivers/nuopc/docs/source/DriverAndCoupling.rst
+72 −210 drivers/nuopc/lnd_comp_domain.F90
+174 −88 drivers/nuopc/lnd_comp_driver.F90
+45 −13 drivers/nuopc/lnd_comp_import_export.F90
+1,793 −1,991 drivers/nuopc/lnd_comp_io.F90
+46 −21 drivers/nuopc/lnd_comp_nuopc.F90
+59 −2 drivers/nuopc/lnd_comp_shr.F90
+346 −333 drivers/nuopc/lnd_comp_types.F90
+1 −1 src/module_sf_noahmp_glacier.F90
+10 −7 src/module_sf_noahmplsm.F90
2 changes: 1 addition & 1 deletion WW3
Open in desktop
Submodule WW3 updated 4 files
+1 −0 model/src/cmake/src_list.cmake
+15 −3 model/src/w3fld1md.F90
+41 −5 model/src/wav_comp_nuopc.F90
+119 −0 model/src/wav_wrapper_mod.F90
4 changes: 4 additions & 0 deletions cmake/Intel.cmake
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Original file line number Diff line number Diff line change
@@ -1,6 +1,10 @@
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -g -traceback -fpp -fno-alias -auto -safe-cray-ptr -ftz -assume byterecl -nowarn -sox -align array64byte -qno-opt-dynamic-align")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -qno-opt-dynamic-align -sox -fp-model source")

if(CMAKE_Platform STREQUAL "derecho.intel")
set(CMAKE_Fortran_LINK_FLAGS "-Wl,--copy-dt-needed-entries")
endif()

if(NOT 32BIT)
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -real-size 64")
endif()
Expand Down
3 changes: 1 addition & 2 deletions cmake/configure_apps.cmake
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Original file line number Diff line number Diff line change
Expand Up @@ -58,7 +58,7 @@ if(APP MATCHES "^(S2S|S2SA|S2SW|S2SWA|S2SWAL)$")
set(WW3 ON CACHE BOOL "Enable WAVEWATCH III" FORCE)
string(CONCAT APP_MSG ${APP_MSG} " with Waves")
endif()
if(APP MATCHES "^(S2SA|S2SWA)")
if(APP MATCHES "^(S2SA|S2SWA|S2SWAL)")
set(UFS_GOCART ON CACHE BOOL "Enable GOCART" FORCE)
string(CONCAT APP_MSG ${APP_MSG} " with Aerosols")
endif()
Expand Down Expand Up @@ -96,5 +96,4 @@ if(APP MATCHES "^(LND)$")
set(CMEPS ON CACHE BOOL "Enable CMEPS" FORCE)
set(CDEPS ON CACHE BOOL "Enable CDEPS" FORCE)
set(NOAHMP ON CACHE BOOL "Enable NOAHMP" FORCE)
set(FMS ON CACHE BOOL "Enable FMS" FORCE)
endif()
2 changes: 1 addition & 1 deletion tests/bl_date.conf
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Original file line number Diff line number Diff line change
@@ -1 +1 @@
export BL_DATE=20240111
export BL_DATE=20240124
10 changes: 7 additions & 3 deletions tests/default_vars.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -455,7 +455,6 @@ export HYBEDMF=.true.
export SHINHONG=.false.
export DO_YSU=.false.
export DO_MYNNEDMF=.false.
export DO_MYJPBL=.false.
export HURR_PBL=.false.
export MONINQ_FAC=1.0
export SFCLAY_COMPUTE_FLUX=.false.
Expand Down Expand Up @@ -510,6 +509,7 @@ export CPLICE=.false.
export CPLWAV=.false.
export CPLWAV2ATM=.false.
export CPLLND=.false.
export CPLLND2ATM=.false.
export USE_MED_FLUX=.false.
export DAYS=1
export NPX=97
Expand Down Expand Up @@ -632,6 +632,8 @@ export PRINT_DIFF_PGR=.false.

# Coupling
export coupling_interval_fast_sec=0
export CHOUR=06
export MOM6_OUTPUT_DIR=./MOM6_OUTPUT
}

# Defaults for the CICE6 model namelist, mx100
Expand Down Expand Up @@ -777,6 +779,7 @@ export SYEAR=2021
export SMONTH=03
export SDAY=22
export SHOUR=06
export CHOUR=06
export FHMAX=24
export FHROT=0
export DT_ATMOS=720
Expand Down Expand Up @@ -821,7 +824,7 @@ export FRAC_GRID=.true.
export CCPP_SUITE=FV3_GFS_v17_coupled_p8
export INPUT_NML=cpld_control.nml.IN
export FIELD_TABLE=field_table_thompson_noaero_tke_GOCART
export DIAG_TABLE=diag_table_p8_template
export DIAG_TABLE=diag_table_cpld.IN
export DIAG_TABLE_ADDITIONAL=''

export FHZERO=6
Expand Down Expand Up @@ -1024,6 +1027,7 @@ export FILENAME_BASE=cfsr.
export MESH_ATM=${FILENAME_BASE//.}_mesh.nc
export atm_datamode=${DATM_SRC}
export stream_files=INPUT/${FILENAME_BASE}201110.nc
export EXPORT_ALL=.false.
export STREAM_OFFSET=0

export BL_SUFFIX=""
Expand All @@ -1044,6 +1048,7 @@ export NTILES=1
export atm_model=datm
export DATM_IN_CONFIGURE=datm_in.IN
export DATM_STREAM_CONFIGURE=hafs_datm.streams.era5.IN
export EXPORT_ALL=.false.
}
export_hafs_docn_cdeps ()
{
Expand Down Expand Up @@ -1386,7 +1391,6 @@ export LSM=3
export LSOIL_LSM=9
export DO_MYNNSFCLAY=.true.
export DO_MYNNEDMF=.true.
export DO_MYJPBL=.true
export HYBEDMF=.false.
export SHAL_CNV=.false.
export DO_SAT_ADJ=.false.
Expand Down
1 change: 0 additions & 1 deletion tests/fv3_conf/control_run.IN
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Original file line number Diff line number Diff line change
Expand Up @@ -82,7 +82,6 @@ else
cp $RFILE INPUT/${RFILE_NEW}
done
fi

fi

if [ $TILEDFIX = .true. ]; then
Expand Down
5 changes: 5 additions & 0 deletions tests/fv3_conf/cpld_control_run.IN
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Expand Up @@ -142,6 +142,11 @@ else
cp ../${DEP_RUN}${SUFFIX}/${RFILE} .
fi

# LAND restart file
if [ $CPLLND = .true. ]; then
cp ../${DEP_RUN}${SUFFIX}/ufs.cpld.lnd.out.${RESTART_FILE_SUFFIX_SECS}.tile*.nc RESTART/.
fi

else
# C48mx500 warm start from ICs
cp ${FV3_IC}/*.nc ./INPUT
Expand Down
22 changes: 22 additions & 0 deletions tests/fv3_conf/lnd_datm_cdeps_era5.IN
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@@ -0,0 +1,22 @@
mkdir -p RESTART INPUT

cd INPUT
rsync -arv @[INPUTDATA_ROOT]/DATM_ERA5_input_data_v2/. .
cd -

SUFFIX=${RT_SUFFIX}
# restart
if [ $WARM_START = .true. ]; then
# NoahMP restart files
cp ../${DEP_RUN}${SUFFIX}/ufs.cpld.lnd.out.${RESTART_FILE_SUFFIX_SECS}.tile*.nc RESTART/.

# CMEPS restart and pointer files
RFILE1=ufs.cpld.cpl.r.${RESTART_FILE_SUFFIX_SECS}.nc
cp ../${DEP_RUN}${SUFFIX}/RESTART/${RFILE1} RESTART/.
ls -1 "RESTART/${RFILE1}">rpointer.cpl

# CDEPS restart and pointer files
RFILE2=ufs.cpld.datm.r.${RESTART_FILE_SUFFIX_SECS}.nc
cp ../${DEP_RUN}${SUFFIX}/${RFILE2} RESTART/.
ls -1 "RESTART/${RFILE2}">rpointer.atm
fi
84 changes: 61 additions & 23 deletions tests/fv3_conf/noahmp_run.IN
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@@ -1,26 +1,64 @@
mkdir -p INPUT RESTART

cd INPUT
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/ufs-land_C96_init_fields.tile1.nc C96.initial.tile1.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/ufs-land_C96_init_fields.tile2.nc C96.initial.tile2.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/ufs-land_C96_init_fields.tile3.nc C96.initial.tile3.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/ufs-land_C96_init_fields.tile4.nc C96.initial.tile4.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/ufs-land_C96_init_fields.tile5.nc C96.initial.tile5.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/ufs-land_C96_init_fields.tile6.nc C96.initial.tile6.nc
if [ "$LNDRES" = "C96" ]; then
inputdir=FV3_input_data
elif [ "$LNDRES" = "C48" ]; then
inputdir=FV3_input_data48
elif [ "$LNDRES" = "C192" ]; then
inputdir=FV3_input_data192
elif [ "$LNDRES" = "C384" ]; then
inputdir=FV3_input_data384
elif [ "$LNDRES" = "C768" ]; then
inputdir=FV3_input_data768
fi
echo "inputdir=$inputdir,LNDRES=$LNDRES"

rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/C96.maximum_snow_albedo.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/C96.slope_type.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/C96.soil_type.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/C96.soil_color.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/C96.substrate_temperature.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/C96.vegetation_greenness.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/C96.vegetation_type.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/oro_C96.mx100.tile1.nc oro_data.tile1.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/oro_C96.mx100.tile2.nc oro_data.tile2.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/oro_C96.mx100.tile3.nc oro_data.tile3.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/oro_C96.mx100.tile4.nc oro_data.tile4.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/oro_C96.mx100.tile5.nc oro_data.tile5.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/C96/oro_C96.mx100.tile6.nc oro_data.tile6.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_input_data/INPUT/C96_grid.tile*.nc .
rsync -arv @[INPUTDATA_ROOT]/FV3_input_data/INPUT/grid_spec.nc C96_mosaic.nc
cd -
if [ $DATM_CDEPS == true ]; then
targetdir="./INPUT"
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/$atm_datamode/ufs-land_@[LNDRES]_init_fields.tile1.nc ./${targetdir}/@[LNDRES].initial.tile1.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/$atm_datamode/ufs-land_@[LNDRES]_init_fields.tile2.nc ./${targetdir}/@[LNDRES].initial.tile2.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/$atm_datamode/ufs-land_@[LNDRES]_init_fields.tile3.nc ./${targetdir}/@[LNDRES].initial.tile3.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/$atm_datamode/ufs-land_@[LNDRES]_init_fields.tile4.nc ./${targetdir}/@[LNDRES].initial.tile4.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/$atm_datamode/ufs-land_@[LNDRES]_init_fields.tile5.nc ./${targetdir}/@[LNDRES].initial.tile5.nc
rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/$atm_datamode/ufs-land_@[LNDRES]_init_fields.tile6.nc ./${targetdir}/@[LNDRES].initial.tile6.nc
else
if [ "$ATMRES" = "$LNDRES" ]; then
targetdir="./INPUT"
cd ${targetdir}
ln -sf grid_spec.nc @[LNDRES]_mosaic.nc
cd -
else
mkdir -p INPUT/$LNDRES
targetdir="./INPUT/$LNDRES"
fi

if [ $WARM_START = .false. ]; then
cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT_L127/sfc_data.tile*.nc ${targetdir}/.
else
# land restart file
cp ../${DEP_RUN}${SUFFIX}/ufs.cpld.lnd.out.${RESTART_FILE_SUFFIX_SECS}.tile*.nc RESTART/.
# CMEPS restart and pointer files
RFILE=ufs.cpld.cpl.r.${RESTART_FILE_SUFFIX_SECS}.nc
cp ../${DEP_RUN}${SUFFIX}/RESTART/${RFILE} .
ls -1 ${RFILE}>rpointer.cpl
# link grid spec file
fi
fi

if [ "$ATMRES" != "$LNDRES" ]; then
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/@[LNDRES].maximum_snow_albedo.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/@[LNDRES].slope_type.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/@[LNDRES].soil_type.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/@[LNDRES].soil_color.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/@[LNDRES].substrate_temperature.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/@[LNDRES].vegetation_greenness.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/@[LNDRES].vegetation_type.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/oro_@[LNDRES].mx*.tile1.nc ${targetdir}/oro_data.tile1.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/oro_@[LNDRES].mx*.tile2.nc ${targetdir}/oro_data.tile2.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/oro_@[LNDRES].mx*.tile3.nc ${targetdir}/oro_data.tile3.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/oro_@[LNDRES].mx*.tile4.nc ${targetdir}/oro_data.tile4.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/oro_@[LNDRES].mx*.tile5.nc ${targetdir}/oro_data.tile5.nc
rsync -arv @[INPUTDATA_ROOT]/FV3_fix_tiled/@[LNDRES]/oro_@[LNDRES].mx*.tile6.nc ${targetdir}/oro_data.tile6.nc
rsync -arv @[INPUTDATA_ROOT]/${inputdir}/INPUT/@[LNDRES]_grid.tile*.nc ${targetdir}/.
rsync -arv @[INPUTDATA_ROOT]/${inputdir}/INPUT/grid_spec.nc ${targetdir}/@[LNDRES]_mosaic.nc
fi
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