publish-book #17
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: publish-book | |
| on: | |
| workflow_dispatch: | |
| env: | |
| NB_KERNEL: python | |
| ORG: neuromatch | |
| NMA_REPO: nasa-open-science | |
| NMA_MAIN_BRANCH: main | |
| PREREQ_REPO: precourse | |
| PREREQ_INTRO: ComputationalNeuroscience | |
| # This job installs dependencies, build the book, and pushes it to `gh-pages` | |
| jobs: | |
| build-and-deploy-book: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| persist-credentials: false | |
| fetch-depth: 0 | |
| ref: ${{ github.head_ref }} | |
| - name: Get commit message | |
| run: | | |
| readonly local msg=$(git log -1 --pretty=format:"%s") | |
| echo "COMMIT_MESSAGE=$msg" >> $GITHUB_ENV | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.9 | |
| - name: Install CI tools | |
| run: | | |
| BRANCH=`python -c 'import os, re; m = re.search(r"nmaci:([\w-]+)", os.environ["COMMIT_MESSAGE"]); print("main" if m is None else m.group(1))'` | |
| # NOTE: might enventually change this back if we integrate changes | |
| wget https://github.com/$ORG/nmaci/archive/refs/heads/$BRANCH.tar.gz | |
| tar -xzf $BRANCH.tar.gz | |
| pip install --upgrade pip | |
| pip install -r nmaci-$BRANCH/requirements.txt | |
| mv nmaci-$BRANCH/scripts/ ci/ | |
| rm -r nmaci-$BRANCH | |
| rm -r $BRANCH.tar.gz | |
| echo ci/ >> .gitignore | |
| - name: Install dependencies | |
| run: | | |
| pip install -r requirements.txt | |
| pip install jupyter-book==0.14.0 ghp-import | |
| pip install jupyter_client==7.3.5 # downgrade jupyter-client to fix hangs | |
| - name: Install XKCD fonts | |
| if: "!contains(env.COMMIT_MESSAGE, 'skip ci')" | |
| run: | | |
| sudo apt-get update -yq | |
| wget http://archive.ubuntu.com/ubuntu/pool/universe/f/fonts-humor-sans/fonts-humor-sans_1.0-4_all.deb | |
| sudo dpkg -i --force-all fonts-humor-sans_1.0-4_all.deb <<< 'yes' | |
| sudo apt install -fy | |
| rm -f $HOME/.matplotlib/fontList.cache | |
| # - name: Copy tutorials from precourse repo | |
| # if: "!contains(env.COMMIT_MESSAGE, 'skip precourse')" | |
| # run: | | |
| # BRANCH=`python -c 'import os, re; m = re.search(r"precourse:([\w-]+)", os.environ["COMMIT_MESSAGE"]); print("main" if m is None else m.group(1))'` | |
| # wget https://github.com/$ORG/$PREREQ_REPO/archive/refs/heads/$BRANCH.tar.gz | |
| # tar -xzf $BRANCH.tar.gz | |
| # mv precourse-$BRANCH/tutorials/W0D* tutorials/ | |
| # cat precourse-main/tutorials/materials.yml tutorials/materials.yml > out.yml | |
| # mv out.yml tutorials/materials.yml | |
| # mv precourse-$BRANCH/prereqs . | |
| # rm -r precourse-$BRANCH | |
| # rm -r $BRANCH.tar.gz | |
| - name: Build student book | |
| run: | | |
| python ci/generate_book.py student | |
| # convert _toc to new format | |
| jupyter-book toc migrate /home/runner/work/nasa-open-science/nasa-open-science/book/_toc.yml -o /home/runner/work/nasa-open-science/nasa-open-science/book/_toc.yml | |
| ln -s ../tutorials book/tutorials | |
| ln -s ../projects book/projects | |
| # ln -s ../prereqs book/prereqs | |
| jupyter-book build book | |
| python ci/parse_html_for_errors.py student | |
| - name: Commit book | |
| run: | | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Action" | |
| ghp-import -n -c "openscience.neuromatch.io" -m "Update course book" book/_build/html | |
| git checkout -f gh-pages | |
| - name: Publish to gh-pages | |
| uses: ad-m/[email protected] | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| branch: gh-pages | |
| force: true |